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    Data summary

    • Publications : 991
    • Phenotypes : 178
    • Genes : 207
    • Mutations : 4583
    • SNVs : 3411
    • InDels : 1172
    • Last Update : 05/11/2017

    Detailed information for RetinalMD_04338






    Basic information
    locationchr1:10035806-10035806 (hg19)
    gene symbolNMNAT1 (Reference) 
    band1p36.22
    referenceA
    observedG
    diseaseLeber congenital amaurosis
    PubMed ID24791140
    ethnicityChinese
    descriptionNMNAT1:NM_001297778:exon3:c.A272G:p.E91G,NMNAT1:NM_001297779:exon3:c.A272G:p.E91G,NMNAT1:NM_022787:e (Reference) 
    MGI
    MGI ID
    MGI phenotype
    OMIM
    OMIM ID
    OMIM phenotype
    Genome feature annotation
    segmental duplicationconserved TFBSEncode TFBSDNase I hypersensitivity sites
    wgEncodeBroadHmm feature annotation
    Gm12878H1hescHepg2HmecHsmmHuvecK562NhekNhlf
    Name=10_Txn_Elongation
    ESP and CG annotation
    ESP5400ESP5400_aaESP5400_eaESP6500ESP6500_aaESP6500_eaESP6500siESP6500si_aaESP6500si_eaCG46CG69
    ------
    dbSNP annotation
    snp137snp135snp132snp131snp130snp129snp137_NonFlaggedsnp135_NonFlaggedsnp132_NonFlaggedsnp131_NonFlaggedsnp130_NonFlagged
    1000 genomes annotation
    2012apr2012apr_eur2012apr_amr2012apr_asn2012apr_afr2012feb2011may2010nov
    Functional prediction
    SIFTSIFT predictPolyPhen2PolyPhen2 predictphyloPphyloP predictLRTLRT predictMTMT predictGERP++GERP++ predictGERP++elemGERP++gt2
    0.7T0.947P0.745P0.039N1D-4.93
    Conserved and constrained region annotation
    multiz46way
    phastcons46way
    phylop46way
    RNA function annotation
    human_predictions_S_C_aug2010human_predictions_S_0_aug2010human_predictions_0_C_aug2010human_predictions_0_0_aug2010circRNAs sebastian memczakconserved functional RNA